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References

The list of references below is not exhaustive. If your paper is missing, you are cordially invited to send it to us at info@highspeedscanning.com.

Books:

  • "Noncontact Atomic Force Microscopy", S. Morita et al., Springer International Publishing, Switzerland (2016).
    T. Uchihashi, N. Kodera, T. Ando
    Chapter 22 (pp.481-527) "High-speed Atomic Force Microscopy" DOI 10.1007/978-3-319-15588-3_22
  • "Atomic Force Microscopy in Nanobiology", Kunio Takeyasu, Pan Stanford Publishing, Singapore (2014).
    T. Uchihahsi, N. Kodera, T. Ando
    Chapter 8 (pp.143-176) "Development of High-speed AFM and Its Biological Applications"
  • "Nanoscale Liquid Interfaces: Wetting, Patterning, and Force Microscopy at the Molecular Scale", Thierry Ondarçuhu & Jean-Pierre Aimé, Pan Stanford Publishing (2013).
    T. Ando, T. Uchihashi
    Chapter (pp.713-742) "Nanovisualization of proteins in action using high-speed AFM"
  • "Single-molecule Studies of Proteins" (Biophysics for the Life Sciences, Vol 2), Andres Oberhauser, Springer (2013).
    T. Uchihashi, N. Kodera, T. Ando
    Chapter 5 (pp.119-147) "Nanovisualization of proteins in action using high-speed AFM"
  • "Experimental Tools for the Intrinsically Disordered Protein Analysis" (Springer series Methods in Molecular Biology, Vol. 897, part 1), Vladimir N.
    Uversky & A. Keith Dunker, Springer (2012).
    T. Ando, N. Kodera
    Chapter 4 (pp.57-69) "Visualization of mobility of atomic force microscopy"
    DOI: 10.1007/978-1-4614-3704-8_4
  • "Control Technologies for Emerging Micro and Nanoscale Systems" (Lecture Notes in Control and Information Sciences, Vol.413), Eleftheriou, Evangelos; Moheimani, S.O. Reza, Springer, ISBN 978-3-642-22172-9 (2011).
    T. Ando
    Chapter "Techniques for developing high-speed AFM"
    P.I. Chang and S.B. Andersson
    Chapter "Non-raster scanning in atomic force microscopy for high-speed imaging of biopolymers"
  • "Atomic force microscopy in liquid", Arturo M. Baró & Donald Refenberger, Wiley-VCH Verlag GmbH (2011/12/15) ISBN-10: 3527327584, ISBN-12: 978-3527327584.
    T. Ando, T. Uchihashi, N. Kodera, M. Shibata, D. Yamamoto, H.Yamashita
    Chapter 7 (pp.189-210), "High-speed AFM for observing dynamic processes in liquid"
  • "Life at the Nanoscale - Atomic force microscopy of live cells", Yves Dufrêne, Pan Stanford Publishing Pte. Ltd. (2011). Print ISBN: 9789814267960 e-Book ISBN 9789814267977
    T.Uchihashi, T. Ando
    Chapter 8, "High-speed atomic force microscopy for dynamic biological imaging"
  • "Atomic force microscopy in biomedical research: Methods and Protocols" (Methods in Molcular Biology (Clifton, N.J.)(2011) Vol. 736, Part 3, 285- 300), Pier C. Braga & Davide Ricci, Humana Press (2009.4.30): DOI: 10.1007/978-1-61779-105-5_18), ISBN-10: 1617791040, ISBN-13: 978-1617791048.
    T. Uchihashi, T. Ando
    Chapter 18, "High-speed Atomic Force Microscopy and Biomolecular Processes"
  • "Handbook of Single-Molecule Biophysics", Peter Hinterdorfer & Antoine van Oijen (Eds.), Springer-Verlarg (2009): ISBN-978-0-387-76496-2.
    T. Ando, T. Uchihasi
    Chapter 17 (pp.487-523), "High-speed atomic force microscopy"
  • "Single Molecule Dynamics in Life Science", T. Yanagida & Yoshiharu Ishii (Eds.) Wiley-VCH (2008): ISBN-10: 3-527-31288-9, ISBN-13: 978-3-527-31288-7.
    T. Ando, T. Uchihashi, N. Kodera, D. Yamamoto, M. Taniguchi, A. Miyagi, H. Yamashita
    Chapter 12 (pp.277-296), "High-speed atomic force microscopy for nano-visualization of biomolecular processes"
  • "High speed and Highly Accurate Tip-Scanning Atomic Force Microscope", Dong-Yeon Lee, VDM Verlag Dr. Müller (2008): ISBN-10: 3639002709, ISBN-13: 978-3639002706, 136 pages.
  • "Roadmap of Scanning Probe Microscopy", Seizo Morita (Ed.), Springer-Verlag (2006): ISBN-10: 3540343148, ISBN-13: 9783540343141.
    T. Ando
    Chapter 14 (pp.109-116), "High-speed SPM"

Papers 2016:

  • Adams J., Erickson B., Grossenbacher J., Brugger J., Nievergelt A., Fantner G.; "Harnessing the damping properties of materials for high-speed atomic force microscopy"; Nature Nanotechnology 11 (2016) p.147-151 DOI:10.1038/nnano.2015.254
  • Amano K., Liang Y., Miyazawa K., Kobayashi K., Hashimoto K., Fukami K., Nishi N., Sakka T., Onishi H., Fukuma T.; "Number density distribution of solvent molecules on a substrate: a transform theory for atomic force microscopy"; Phys. Chem. Chem. Phys. 18 (2016) p.15534-15544 DOI: 10.1039/C6CP00769D
  • Ando T., Kodera N.; "Structural and Functional Analyses of IDPs by High-Speed AFM Imaging"; Biophysical Journal 110 3 (2016)
  • Dukic M., Winhold M., Schwalb Ch., Adams J., Stavrov V., Huth M., Fantner G.; "Direct-write nanoscale printing of nanogranular tunnelling strain sensors for sub-micrometer cantilevers"; Nature Communications 7 (2016) p.12487 DOI: 10.1038/ncomms12487
  • Eeftens J., Katan A., Kschonsak M., Hassler M., de Wilde L., Dief E., Haering C., Dekker C.; "Condensin Smc2-Smc4 Dimers Are Flexible and Dynamic"; Cell Reports 14 (2016) p.1-6 DOI: http://dx.doi.org/10.1016/j.celrep.2016.01.063
  • Hosseini N., Nievergelt A., Adams J., Stavrov V., Fantner G.; "A monolithic MEMS position sensor for closed-loop high-speed atomic force microscopy"; Nanotechnology 27 135705 (2016)
  • Karner A., Nimmervoll B., Plochberger B., Klotzsch E., Horner A., Knyazev D., Kuttner R., Winkler K., Winter L., Siligan Ch., Ollinger N., Pohl P., Preiner J.; "Tuning membrane protein mobility by confinement into nanodomains"; Nature Nanotechnology (2016) DOI:10.1038/nnano.2016.236
  • Khmelinskaia A., Franquelim H., Petrov E., Schwille P.; "Effect of anchor positioning on binding and diffusion of elongated 3D DNA nanostructures on lipid membranes"; J. Phys. D: Appl. Phys. 49 (2016) 194001 DOI:10.1088/0022-3727/49/19/194001
  • Kumar S.,Cartron M., Mullin N., Qian P., Leggett G., Hunter N., Hobbs J.; "Direct Imaging of Protein Organization in an Intact Bacterial Organelle Using High-Resolution Atomic Force Microscopy"; ACS Nano (2016) DOI: 10.1021/acsnano.6b05647
  • Liao H., Carvajal N., Fu X., Raftari M., Jin A.; "Developing High-Speed AFM and Nanomechanical Characterizations for Biomedical Investigations"; Biophysical Journal 110 (2016)
  • Miyagi A., Chipot C., Rangl M.,Scheuring S.; "High-speed atomic force microscopy shows that annexin V stabilizes membranes on the second timescale"; Nature Nanotechnology (2016) DOI:10.1038/nnano.2016.89
  • Miyagi A.,Scheuring S.; "Automated force controller for amplitude modulation atomic force microscopy"; Rev. Sci. Instrum. 87 053705 (2016) http://dx.doi.org/10.1063/1.4950777
  • Miyazawa K., Kobayashi N., Watkins M., Shluger A., Amano K., Fukuma T.; "A relationship between three-dimensional surface hydration structures and force distribution measured by atomic force microscopy"; Nanoscale 8 (2016) 7334 DOI: 10.1039/c5nr08092d
  • Morante K., Bellomio A., Gil-Cartón D., Redondo-Morata L., Sot J.,Scheuring S., Valle M., González-Mañas J. M., Tsumoto K., Caaveiro J.; "Identification of a membrane-bound prepore species clarifies the lytic mechanism of actinoporins"; The Journal of Biological Chemistry 291 (2016) p.19210-19219 doi: 10.1074/jbc.M116.734053
  • Munguira I., Casuso I., Takahashi H., Rico F., Miyagi A., Chami M., Scheuring S.; "Glasslike Membrane Protein Diffusion in a Crowded Membrane"; ACS Nano 10 (2) (2016) p.2584-2590 DOI: 10.1021/acsnano.5b07595
  • Nishiguchi S., Yagi A., Sakai N., Oda H.; "Divergence of structural strategies for homophilic E-cadherin binding among bilaterians"; J Cell Sci 129 (2016) p.3309-3319 DOI:10.1242/jcs.189258
  • Ngunjiri J., Meyers G., Cameron J., Suzuki Y., Jeon H., Lee D., Choi K., Kim J., Im K., Lim H.; " High speed AFM studies of 193 nm immersion photoresists during TMAH development"; Proc. SPIE 9779, Advances in Patterning Materials and Processes XXXIII (2016) DOI:10.1117/12.2218956
  • Rangl M., Miyagi A., Kowal J., Stahlberg H., Nimigean C., Scheuring S.; "Real-time visualization of conformational changes within single MloK1 cyclic nucleotide-modulated channels"; Nature Communications 7 12789 (2016) doi:10.1038/ncomms12789
  • Ruan Y., Rezelj S., Bedina Zavec A., Anderluh G., Scheuring S.; "Listeriolysin O Membrane Damaging Activity Involves Arc Formation and Lineaction -- Implication for Listeria monocytogenes Escape from Phagocytic Vacuole"; PLOS Pathogens 12(4) (2016) DOI:10.1371/journal.ppat.1005597
  • Soltani Bozchalooi I., Houck A., AlGhamdi J., Youcef-Toumi K.; "Design and control of multi-actuated atomic force microscope for large-range and high-speed imaging"; Ultramicroscopy 160 (2016) p.213-224 DOI: 10.1016/j.ultramic.2015.10.016
  • Takahashi H., Miyagi A., Redondo-Morata L., Scheuring S.; "Temperature-Controlled High-Speed AFM: Real-Time Observation of Ripple Phase Transitions"; Small (2016) DOI: 10.1002/smll.201601549
  • Uchihashi T., Watanabe H., Fukuda S., Shibata M., Ando T.; "Functional extension of high-speed AFM for wider biological applications"; Ultramicroscopy 160 (2016) p.182-196
  • Wang A., Vijayraghavan K., Solgaard O., Butte M.; "Fast Stiffness Mapping of Cells Using High-Bandwidth Atomic Force Microscopy"; ACS Nano 10 (2016) p. 257-264
  • Watanabe-Nakayama T., Itami M., Kodera N., Ando T., Konno H.; "High-speed atomic force microscopy reveals strongly polarized movement of clostridial collagenase along collagen fibrils" Sci. Rep. 6 (2016) 28975 DOI: 10.1038/srep28975
  • Yamamoto D., Ando T.; "Chaperonin GroEL–GroES Functions as both Alternating and Non-Alternating Engines"; Journal of Molecular Biology 428 (2016) 15 p.3090-3101 DOI: http://dx.doi.org/10.1016/j.jmb.2016.06.017

Papers 2015:

  • Adams J., Erickson B., Grossenbacher J., Brugger J., Nievergelt A., Fantner G.; "Harnessing the damping properties of materials for high-speed atomic force microscopy"; Nature Nanotechnology - Letter (2015)
  • Davies T., Kodera N., Kaminski Schierle G., Rees E., Erdelyi M., Kaminski C., Ando T., Mishima M.; "CYK4 Promotes Antiparallel Microtubule Bundling by Optimizing MKLP1 Neck Conformation"; PloS Biol. 13(4): e100212 (2015) doi:10.1371/journal.pbio.1002121
  • Fukuda S., Uchihashi T., Ando T.; "Method of mechanical holding of cantilever chip for tip-scan high-speed atomic force microscopy"; Rev. Sci. Instrum. 86 063703 (2015) DOI: 10.1063/1.4922381
  • Herfst R., Dekker B., Witvoet G., Crowcombe W., de Lange D., Sadeghian H.; "A miniaturized, high frequency mechanical scanner for high speed atomic force microscope using suspension on dynamically determined points"; Review of Scientific Instruments 86 113703 (2015) DOI: 10.1063/1.4935584
  • Horner A., Zocher F., Preiner J., Ollinger N., Siligan C., Akimov S., Pohl P.; "Mobility of Single-File Water Molecules in Aquaporins"; Biophysical Journal 108 (2015) DOI:10.1016/j.bpj.2014.11.1005
  • Horner A., Zocher F., Preiner J., Ollinger N., Siligan C., Akimov S., Pohl P.; "The mobility of single-file water molecules is governed by the number of H-bonds they may form with channel-lining residues"; Sci. Adv. 1 (2015)
  • Ikai T., Takagi Y., Shinohara K., Maeda K., Kanoh S., "Synthesis of polyisocyanides bearing oligothiophene pendants: higher-order structural control through pendant framework design"; Polymer Journal 47 (2015) p.625–630 DOI:10.1038/pj.2015.42
  • Imamura M., Uchihashi T., Ando T., Leifert A., Simon U., Malay A., Heddle. J.; "Probing Structural Dynamics of an Artificial Protein Cage Using High-Speed Atomic Force Microscopy"; Nano Lett. 15 (2015) p.1331-1335 DOI: 10.1021/nl5045617
  • Katan A., Vlijm R., Lusser A., Dekker C.; "Dynamics of nucleosomal structures measured by High-Speed Atomic Force Microscopy"; Small 11 (2015) p.976-984 DOI: 10.1002/smll.201401318
  • Klapetek P., Valtr M., Picco L., Payton O., Martinek J., Yacoot A., Miles M.; "Large area high-speed metrology SPM system"; Nanotechnology. 26 6 (2015)
  • Kodera N., Uchida K., Ando T., Aizawa S.; "Two-ball structure of the flagellar hook-length control protein FliK as revealed by high-speed atomic force microscopy"; J. Mol. Biol. 427 (2015) p.406-414 doi: 10.1016/j.jmb.2014.11.007
  • Lee A., Szymonik M., Hobbs J., Wälti Ch.; "Tuning the translational freedom of DNA for high speed AFM"; Nano Research 8 6 (2015) p.1811-1821 DOI 10.1007/s12274-014-0681-y
  • Lyubchenko Y., Shlyakhtenko S.; "Chromatin Imaging with Time-Lapse Atomic Force Microscopy"; Methods Mol Biol. 1288 (2015) p.27-42 DOI: 10.1007/978-1-4939-2474-5_3
  • Matsumoto R., Uemura T., Xu Z., Yamaguchi I., Ikoma T., Tanaka J.; "Rapid oriented fibril formation of fish scale collagen facilitates early osteoblastic differentiation of human mesenchymal stem cells"; J. Biomed Mater Res A. 103 (8) (2015) p.2531-2539 DOI: 10.1002/jbm.a.35387
  • Minegishi S., Itani T.; "The effect of resist material composition on development behavior"; Proc. SPIE 9425 Advances in Patterning Materials and Processes XXXII 94251I (March 20, 2015) DOI:10.1117/12.2085820
  • Miyazawa K., Izumi H., Watanabe-Nakayama T., Asakawa H., Fukuma T.; "Fabrication of electron beam deposited tip for atomic-scale atomic force microscopy in liquid"; Nanotechnology 26 (2015) doi:10.1088/0957-4484/26/10/105707
  • Mulvihill E., van Pee K., Mari S., Müller D., Yildiz ö.; "Directly Observing the Lipid-Dependent Self-Assembly and Pore-Forming Mechanism of the Cytolytic Toxin Listeriolysin O"; Nano Lett. 15 10 (2015) p. 6965-6973 DOI: 10.1021/acs.nanolett.5b02963
  • Ngo K., Kodera N., Katayama E., Kojima S., Nagasaki A., Ando T., Uyeda T.; "Cofilin-induced unidirectional cooperative conformational changes in actin filaments revealed by high-speed AFM"; e-Life 4 (2015)
  • Nievergelt A., Erickson B., Hosseini N., Adams J., Fantner G.; "Studying biological membranes with extended range high-speed atomic force microscopy"; Scientific Reports 5 (2015) p.11987
  • Nimmervoll B., Chtcheglova L., Juhasz K., Cremades N., Aprile F.,Sonnleitner A., Hinterdorfer P., Vigh L., Preiner J., Balogi Z.; "Cell surface localised Hsp70 is a cancer specific regulator of clathrin-independent endocytosis"; FEBS Letters 589 (2015)
  • Oestreichera Z., Taoka A., Fukumori Y.; "A comparison of the surface nanostructure from two different types of gram-negative cells: Escherichia coli and Rhodobacter sphaeroides"; Micron 72 (2015) p.8-14 DOI: 10.1016/j.micron.2015.02.001
  • Preiner J., Horner A., Karner A., Ollinger N., Siligan C., Pohl P., Hinterdorfer P.; "High-Speed AFM images of thermal motion provide stiffness map of interfacial membrane protein moieties"; Nano Letters 15 (2015) p.759−763
  • Ricci M., Segura J., Erickson B., Fantner G., Stellacci F., Voitchovsky K.; "Growth and dissolution of calcite in the presence of adsorbed stearic acid"; Langmuir 31 27 (2015) p. 7563-7571
  • Santillan J., Shichiri M., Itani T.; "The effect of resist dissolution process on pattern formation variability: an in situ analysis using high-speed atomic force microscopy"; Proc. SPIE 9425 Advances in Patterning Materials and Processes XXXII 942506 (March 20, 2015) DOI:10.1117/12.2085746
  • Santillan J., Shichiri M., Itani T.; "In situ characterization of nano-scale pattern roughness during resistdissolution process"; Microelectronic Engineering Volume 143 1 (2015) p.64-68
  • Schuh A., Soltani Bozchalooi I., Rangelow I., Youcef-Toumi K.; "Estimator based multi-eigenmode control of cantilevers in multifrequency Atomic Force Microscopy"; Proceedings of the American Control Conference 2015 (2015) DOI: 10.1109/ACC.2015.7171011
  • Schuh A., Soltani Bozchalooi I., Rangelow I., Youcef-Toumi K.; "Multi-eigenmode control for high material contrast in bimodal and higher harmonic atomic force microscopy"; Nanotechnology 26(23):235706 (2015) DOI: 10.1088/0957-4484/26/23/235706
  • Shibata M., Uchihashi T., Ando T., Yasuda R.; "Long-tip high-speed atomic force microscopy for nanometer-scale imaging in live cells"; Sci. Rep. 5 (2015) DOI:10.1038/srep08724
  • Soltani Bozchalooi I., Houck A., Youcef-Toumi K.; "A study on the effectiveness of proportional-integral-derivative control in multi-actuated atomic force microscopy"; Proceedings of the American Control Conference 2015 (2015) p.3478-3483 DOI: 10.1109/ACC.2015.7171869
  • Stamov D., Stock E., Franz C., Jähnke T., Haschke H.; "Imaging collagen type I fibrillogenesis with high spatiotemporal resolution"; Ultramicroscopy 149 (2015) p.86-94
  • Suzuki T., Kawaguchi A., Ainai A., Tamura S., Ito R., Multihartina P., Setiawaty V., Pangesti K., Odagiri T., Tashiro M., Hasegawaa H.; "Relationship of the quaternary structure of human secretory IgA to neutralization of influenza virus"; Proceedings of the National Academy of Sciences of the United States of America 112(25) (2015) p.7809-7814 DOI:10.1073/pnas.1503885112.
  • Suzuki Y., Endo M., Sugiyama H.; "Lipid-bilayer-assisted two-dimensional self-assembly of DNA origami nanostructures"; Nat. Commun. 6:8052 (2015) DOI: 10.1038/ncomms9052
  • Takeda K., Uchihashi T., Watanabe H., Ishida T., Igarashi K., Nakamura N., Ohno H.; "Real-time dynamic adsorption processes of cytochrome c on an electrode observed through electrochemical high-speed atomic force microscopy"; PLoS One 10 (2015) DOI:10.1371/journal.pone.0116685
  • Yoshida A., Sakai N., Uekusa Y., Deguchi K., Gilmore J., Kumeta M., Ito S., Takeyasu K.; "Probing in vivo dynamics of mitochondria and cortical actin networks using high-speed atomic force/fluorescence microscopy"; Genes to Cells 20 (2015) p.85-94
  • Zhang K., Hatano T., Nguyen Tien T., Herrmann G., Christopher E., Burgess S., Miles M.; "An adaptive non-raster scanning method in Atomic Force Microscopy for simple sample shapes"; Measurement Science and Technology 26 (2015) p.035401

Papers 2014:

  • Adams J., Nievergelt A., Erickson B., Yang C., Dukic M., Fantner G.; "High-speed imaging upgrade for a standard sample scanning atomic force microscope using small cantilevers"; Review of Scientific Instruments 85 093702 (2014) 093702 doi: 10.1063/1.489546
  • Akrami S., Miyata K., Asakawa H., Fukuma T.; "High-speed Z tip scanner with screw cantilever holding mechanism for atomic-resolution atomic force microscopy in liquid"; Rev. Sci. Instrum. 86 (2014) p. 126106
  • Ando T., Uchihashi T., Scheuring S.; "Filming biomoleculear processes by high-speed atomic force microscopy"; Chem. Rev. 114 (2014) p.3120-3188 doi:0.1021/cr4003837
  • Ando T., "High-speed AFM imaging", Curr. Opin. Struct. Biol. 28 (2014) p.63-68 DOI:10.1016/j.sbi.2014.07.011
  • Braunsmann C., Prucker V., Schäffer T.; "Optical knife-edge displacement sensor for high-speed atomic force microscopy"; Applied Physics Letters 104 (2014) 103101
  • Braunsmann C., Seifert J., Rheinlaender J., Schäffer T.; "High-speed force mapping on living cells with a small cantilever atomic force microscope"; Review of Scientific Instruments 85 (2014) 073703
  • Eghiaian F., Rico F., Colom A., Casuso I., Scheuring S.; "High-speed atomic force microscopy: Imaging and force spectroscopy"; FEBS letters Vol 588 Issue 19 (2014) p.3631-3638
  • Endo M., Sugiyama H.; "Single-Molecule Imaging of Dynamic Motions of Biomolecules in DNA Origami Nanostructures Using High-Speed Atomic Force Microscopy"; Acc. Chem. Res. 47 (6) (2014) p.1645-1653
  • Fujita Y., Furushima R., Ohno H., Sagawa F., Inoue T.; "Cell-surface receptor control that depends on the size of a synthetic equilateral-triangular RNA-protein complex"; Scientific Reports 4 6422 (2014) DOI:10.1038/srep06422
  • Igarashi K., Uchihashi T., Uchiyama T., Sugimoto H., Wada M., Suzuki K., Sakuda S., Ando T., Watanabe T., Samejima M.; "Two-way traffic of glycoside hydrolase family 18 processive chitinases on crystalline chitin"; Nature Communications 5 (2014) 3975
  • Ishino S., Yamagami T., Kitamura M., Kodera N., Mori T., Ando T., Goda N., Hiroaki H., Ishino Y.; "Multiple Interactions of the Intrinsically Disordered Region between the Helicase and Nuclease Domains of the Archaeal Hef Protein"; J. Biol. Chem. 289 (2014) p.21627-21639
  • Kodera N., Ando T.; "The path to visualization of walking myosin V by high-speed atomic force microscopy"; Biophys. Rev (2014) p.237-260 DOI:10.1007/s12551-014-0141-7
  • Liao H.-S., Chen Y.-H., Ding R.-F., Huang H.-F., Wang W.-M., Hwu E.-T., Huang K.-Y., Chang C.-S., Hwang I.-S.; "High-speed atomic force microscope based on an astigmatic detection system"; Review of Scientific Instruments 85 (2014) 103710 DOI: 10.1063/1.4898019
  • Leung C., Dudkina N., Lukoyanova N., Hodel A., Farabella I., Pandurangan A., Jahan N., Pires Damaso M., Osmanović D., Reboul C., Dunstone M., Andrew P., Lonnen R., Topf M., Saibil H., Hoogenboom B.; "Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin"; eLife (2014) DOI: 10.7554/eLife.04247
  • Nakamura A., Watanabe H., Ishida T., Uchihashi T., Wada M., Ando T., Igarashi K., Samejima M.; "Trade-off between processivity and hydrolytic velocity of cellobiohydrolases at the surface of crystalline cellulose"; J. Am. Chem. Soc. 136 (2014) p.4584-4592
  • Nievergelt A., Adams J., Odermatt P., Fantner G.; "High-frequency multimodal atomic force microscopy"; Beilstein J. Nanotechnol. 2014 5 (2014) p.2459-2467 doi:10.3762/bjnano.5.255
  • Ngo K., Kodera N., Nagasaki A., Ando T., Uyeda T.; "Video Imaging of Cofilin-Induced Actin Filament Severing by High Speed AFM"; Biophysical Journal 106 2 (2014)
  • Plesa C., Ananth A., Linko V.,Gülcher C., Katan A., Dietz H., Dekker C.; "Ionic Permeability and Mechanical Properties of DNA Origami Nanoplates on Solid-State Nanopores"; ACS Nano 7 (1) (2014) p.35-43
  • Plochberger B., Schuetz G., Röhrl C., Preiner J., Sezgin E., Brameshuber M., Weghuber J., Wieser S., Rankl C., Ruprecht V., MadlJ., Bittman R., Hinterdorfer P., Stangl H.; "HDL-Lipid Uptake is Regulated by Elastic Properties of the Plasma Membrane"; Biophysical Journal 106 (2014) DOI:10.1016/j.bpj.2013.11.2216
  • Preiner J., Kodera N., Tang J., Ebner A., Brameshuber M., Blaas D., Ilk N., Gruber H.J., Ando T., Hinterdorfer P.; "IgGs are made for walking on bacterial and viral surfaces"; Nature Communications 5 (2014) 4394. DOI: 10.1038/ncomms5394
  • Rajendran A., Endo M., Sugiyama H.; "State-of-the-Art High-Speed Atomic Force Microscopy for Investigation of Single-Molecular Dynamics of Proteins"; Chem. Rev. 114 (2) (2014) p.1493-1520
  • Rajendran A., Endo M., Hidaka K., Tran P., Teulade-Fichou M., Mergny J.-L., Sugiyama H.; "G-quadruplex-binding ligand-induced DNA synapsis Inside a DNA Origami Frame"; RSC. Adv. 4 (2014) p.6346-6355
  • Rajendran A., Endo M., Hidaka K., Sugiyama H.; "Direct and Single-Molecule Visualization of the Solution-State Structures of G-Hairpin and G-Triplex Intermediates"; Angew. Chem. Int. Ed. 53 16 (2014) p.4107-4112
  • Santillan J., Shichiri M., Itani T.; "An in situ analysis of resist dissolution in alkali-based and organic solvent-based developers using high speed atomic force microscopy"; Proc. SPIE 9051 Advances in Patterning Materials and Processes XXXI 90510O (March 27, 2014) DOI:10.1117/12.2045886
  • Santillan J., Yamada K., Itani T.; "In situ analysis of negative-tone resist pattern formation using organic-solvent-based developer process"; Appl. Phys. Express 7 (2014) 016501DOI:10.7567/APEX.7.016501
  • Scheuring S., Rico F., Colom A., Casuso I.; "High-Speed Atomic Force Microscopy: Integration with Optical Microscopy and High-Speed Force Spectroscopy"; Biophysical Journal 106 2 (2014) p.797
  • Schlecker B., Dukic M., Erickson B., Ortmanns M., Fantner G.; "Single-Cycle-PLL Detection for Real-Time FM-AFM Applications"; IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 8 2 (2014) p.206-215
  • Shibafuji Y., Nakamura A., Uchihashi T., Sugimoto N., Fukuda S., Watanabe H., Samejima M., Ando T., Noji H., Koivula A., Igarashi K., Iino R.; "Single-molecule imaging analysis of elementary reaction steps of Trichoderma Reesei cellobiohydrolase I (Cel7A) hydrolyzing crystalline cell"; J. Biol. Chem. 289 (2014) p.14056-14065
  • Soltani Bozchalooi I., Youcef-Toumi K.; "Control design for division and compensation with application to high-speed/large-range nano-positioning"; Proceedings of the American Control Conference (2014) DOI: 10.1109/ACC.2014.6859262
  • Soltani Bozchalooi I., Youcef-Toumi K.; "Multi-actuation and PI control: a simple recipe for high-speed and large-range atomic force microscopy"; Ultramicroscopy 146 (2014) p.117-124 DOI: 10.1016/j.ultramic.2014.07.010
  • Suzuki Y., Endo M., Katsuda Y., Ou K., Hidaka K., Sugiyama H.; "DNA Origami Based Visualization System for Studying Site-Specific Recombination Events"; J. Am. Chem. Soc. 136 (2014) p.211-218
  • Suzuki Y., Endo M., Yang Y., Sugiyama H.; "Dynamic Assembly/Disassembly Processes of Photoresponsive DNA Origami Nanostructures Directly Visualized on a Lipid Membrane Surface"; J. Am. Chem. Soc. 136 (2014)p.1714-1717
  • Takenaka T., Endo M., Suzuki Y., Yang Y., Emura T., Hidaka K., Kato T., Miyata T., Namba K., Sugiyama H.; "Photoresponsive DNA nanocapsule having an open/close system for capture and release of nanomaterials"; Chemistry 20 (46) (2014) p.14951-14954 DOI: 10.1002/chem.201404757
  • Xiong Z., Mairiaux E., Walter B., Faucher M., Buchaillot L., Legrand B. ; "A Novel Dog-Bone Oscillating AFM Probe with Thermal Actuation and Piezoresistive Detection"; Sensors 14 11 (2014) p. 20667-20686 DOI:10.3390/s141120667
  • Yang Y., Endo M., Suzuki Y., Hidaka K., Sugiyama H.; "Direct Observation of the Dual-Switching Behaviours Corresponding to the State Transition in a DNA Nanoframe"; Chem. Comm. 50 (2014) p.4211-4213
  • Zhang K., Herrmann G., Edwards C., Burgess S., Miles M.; "A Non-raster Scanning Approach in Atomic Force Microscopy Using a Combined Contour Prediction Algorithm"; Proceedings of the 19th World Congress of the International Federation of Automatic Control Vol. 19 (2014) p.5908-5913

Papers 2013:

  • Ando T.; "High-speed atomic force microscopy of protein dynamics: myosin on actin and rotary enzyme F1-ATPase"; Microscopy & Analysis 27(3) (2013)
  • Ando T.; "Molecular Machines directly observed by high-speed atomic force microscopy"; FEBS Lett. 587 (2013) p.997-1007
  • Ando T., Uchihashi T., Kodera N.; "High-speed AFM and applications to biomolecular systems"; Annu. Rev. Biophys. 42 (2013) p393-414.
  • Ando T.; "High-speed atomic force microscopy"; Microscopy 62 (2013) p.81-93
  • Boekfah A., Devasia S.; "Output-Boundary Regulation: High-Speed AFM Imaging Application"; Proceedings of ASME 2013 Dynamic Systems and Control Conference (2013)
  • Brown B., Picco L., Miles M., Faul C.; "Opportunities in High-Speed Atomic Force Microscopy"; Small Journal DOI: 10.1002/smll.201203223
  • Chang P., Chavan D., Paris R., Iannuzzi D., Schitter G.; "Towards High Speed Ferrule-Top Atomic Force Microscopy"; Proceedings of the 6th IFAC Symposium on Mechatronic Systems (2013), p.131-137
  • Colom A., Casuso I., Rico F., Scheuring S.; "A hybrid high-speed atomic force-optical microscope for visualizing single membrane proteins on eukaryotic cells"; Nature communications 4 (2013)
  • Dhakal S., Mao H., Rajendran A., Endo M., Sugiyama H.; "G-quadruplex nanostructures probed at the single molecular level by force based methods"; Guanine Quartets: Structure and Application (Royal Society of Chemistry) (2013) p.73-85
  • Endo M., Yang Y., Sugiyama H.; "DNA origami technology for biomaterials applications"; Biomater. Sci. 1 (2013) p347-360
  • Endo M., Yamamoto S., Tatsumi K., Emura T., Hidaka K., Sugiyama H.; "RNA-templated DNA origami structures"; Chem. Comm. 49 (2013) p.2879-2881
  • Endo M., Inoue M., Suzuki Y., Masui C., Morinaga H., Hidaka K., Sugiyama H.; "Regulation of B-Z Conformational Transition and Complex Formation with a Z-form-binding Protein by Introduction of Constraint to Double-stranded DNA using DNA Nanoscaffold"; Chem. Eur. J. 19 (2013) p.16887-16890
  • Fukuda S., Uchihashi T., Iino R., Okazaki Y., Yoshida M., Igarashi K., Ando T.; "High-speed atomic force microscope combined with single-molecule fluorescence microscope"; Rev. Sci. Instrum. 84 (2013) p.073706
  • Hashimoto M., Kodera N., Tsunaka Y., Oda M., Tanimoto M., Ando T., Morikawa K., Tate S.; "Phosphorylation-coupled intramolecular dynamics of unstructured regions in chromatin remodeler FACT"; Biophys. J. 104 10 (2013) p.2222-2234
  • Itani T., Kozawa T.; "Resist Materials and Processes for Extreme Ultraviolet Lithography"; Jpn. J. Appl. Phys. 52 (2013) 010002 DOI:10.7567/JJAP.52.010002
  • Kim B., Boehm R.; "Imaging Stability in Force-Feedback High-Speed Atomic Force Microscopy" Ultramicroscopy 125 (2013) p.29-34
  • Lee B., Somnath S., King W.; "Fast nanotopography imaging using a high speed cantilever with integrated heater-thermometer"; Nanotechnology 24 (2013)
  • Liu L, Scheuring S.; "Investigation of photosynthetic membrane structure using atomic force microscopy"; Trends Plant Sci. 18(5) (2013) p.277-86
  • Lyubchenko Y.; "AFM visualization of protein-DNA interactions"; Biophysics for the Life Sciences 2 (2013) p.97-117
  • Miyata K., Usho S., Yamada S., Furuya S., Yoshida K., Asakawa H., Fukuma T.; "Separate-type scanner and wideband high-voltage amplifier for atomic-resolution and high-speed atomic force microscopy"; Rev. Sci. Instrum. 84 (2013) p.043705
  • Miyata K., Asakawa H., Fukuma T.; " Real-time atomic-resolution imaging of crystal growth process in water by phase modulation atomic force microscopy at one frame per second "; Appl. Phys. Lett. 103 (2013) p.203104
  • Nia H., Soltani Bozchalooi I., Li Y., Grodzinsky A.; "High-Bandwidth AFM-Based Rheology Reveals that Cartilage is Most Sensitive to High Loading Rates at Early Stages of Impairment";  Biophysical Journal 104(7) (2013) p.1529-1537 DOI: 10.1016/j.bpj.2013.02.048
  • Noi K., Yamamoto D., Nishikori S., Arita-Morioka K., Ando T., Ogura T.; "High-Speed Atomic Force Microscopic Observation of ATP-Dependent Rotation of the AAA+ Chaperone p97"; Structure 2 (2013) p.1992-2002
  • Picas L., Rico F., Deforet M., Scheuring S.; "Structural and mechanical heterogeneity of the erythrocyte membrane reveals hallmarks of membrane stability"; ACS Nano 7 (2) (2013) p.1054-1063
  • Preiner J., Kodera N., Tang J., Ebner A., Brameshuber M., Blaas D., Ilk N., Gruber H., Ando T., Hinterdorfer P.; "Antibody Movement on Regular Antigen Clusters: Fab Arms are made for Walking"; Biophysical Journal 104 (2013) DOI:10.1016/j.bpj.2012.11.2122
  • Rajendran A., Endo M., Hidaka K., Sugiyama H.; "Direct and real-time observation of rotary movement of a DNA nanomechanical device"; J. Am. Chem. Soc. 135 (2013) p.1117-1123
  • Rajendran A., Endo M., Hidaka K., Sugiyama H.; "Control of the two-dimensional crystallization of DNA origami with various loop arrangements"; Chem. Comm. 49 (2013) p.686-688
  • Rajendran A., Endo M., Hidaka K., Tran P., Mergny J.-L., Sugiyama H.; "Controlling the stoichiometry and strand polarity of a tetramolecular G-quadruplex structure by using a DNA origami frame"; Nucleic Acids Research 41 (2013) p.8738-8747
  • Rajendran A., Endo M., Hidaka K., Tran P., Mergny J.-L., Gorelick R., Sugiyama H.; "HIV-1 Nucleocapsid Proteins as Molecular Chaperones for Tetramolecular Antiparallel G-Quadruplex Formation"; J. Am. Chem. Soc. 135 (2013) p.18575-18585
  • Rana M., Pota H., Petersen I.; "High-Speed AFM Image Scanning Using Observer-Based MPC-Notch Control"; IEEE Transactions on Nanotechnology 12 2 (2013) p.246-254
  • Rico F., González L., Casuso I., Puig-Vidal M., Scheuring S.; "High-Speed AFM Force Spectroscopy Unfolds Titin at the Speed of Molecular Dynamics Simulations"; Science 342 (6159) (2013) p.741-743
  • Santillan J., Itani T.; "Dissolution Characteristics of EUV Resist by High Speed AFM"; J. Photopoly. Sci. Technol. 25 1 (2013) p.95-100
  • Santillan J., Itani T.; "In situ dissolution analysis of half-pitch line and space patterns at various resist platforms using high-speed atomic force microscopy"; Proc. SPIE 8682 (2013) 86820I
  • Santillan J., Itani T.; "In situ analysis of the EUV resist pattern formation during the resist dissolution process"; J. Photopoly. Sci. Technol. 26 5 (2013) p.611-616
  • Scheuring S., Casuso I., Rico F., Colom A.; "High-Speed Atomic Force Microscopy of Protein-Protein Interactions"; Biophysical Journal 104 2 (2013) p.386
  • Shiobara E., Kikuchi Y., Itani T.; "Study of LWR reduction and pattern collapse suppression for 16nm node EUV resists"; Proc. SPIE 8679 (2013) 86792B
  • Shlyakhtenko L., Lushnikov A., Miyagi A., Li M., Harris R., Lyubchenko Y.; "Atomic force microscopy studies of APOBEC3G oligomerization and dynamics"; J. Struct Biol. 184(2) (2013) p.217-25
  • Suzuki Y., Goetze T., Stroebel D., Balasuriya D., Yoshimura S., Henderson R., Paoletti P., Takeyasu K., Edwardson J.; "Visualization of Structural Changes Accompanying Activation of N-Methyl-D-aspartate (NMDA) Receptors Using Fast-scan Atomic Force Microscopy Imaging"; J. Biol. Chem. 288 (2013) p.778-784
  • Suzuki Y., Sakai N., Yoshida A., Uekusa Y., Yagi A., Imaoka Y., Ito S., Karaki K., Takeyasu K.; "High-speed atomic force microscopy combined with inverted optical microscopy for studying cellular events"; Sci. Rep. 3 (2013) p.2131 DOI:10.1038/srep02131
  • Tuma T., Haeberle W., Rothuizen H., Lygeros J., Pantazi A., Sebastian A.; "Dual-stage nanopositioning for high-speed scanning probe microscopy"; IEEE/ASME Transactions on Mechatronics 99 (2013) p.1-11
  • Uchihashi T., Kodera N., Ando T.; "Nanovisualization of proteins in action using high-speed AFM"; Biophysics for the Life Sciences 2 (2013) p.119-147
  • Vermeer R., Sarajlic E., Siekman M., Kawakatsu H., Fujita H., Tas N., Jansen H.; "Electrostatically actuated double cantilever AFM probe for high speed imaging"; Proceedings of the Transducers & Eurosensors XXVII (2013) p. 912 - 915
  • Watanabe H., Uchihashi T., Kobashi T., Shibata M., Nishiyama J., Yasuda R., Ando T.; "Wide-area scanner for high-speed atomic force microscopy"; Rev. Sci. Instrum. 84 (2013) p.053702
  • Yamashita H., Inoue K., Shibata M., Uchihashi T., Sasaki J., Kandori H., Ando T.; "Role of trimer-trimer interaction of bacteriorhodopsin studied by optical spectroscopy and high-speed atomic force microscopy"; J. Struct. Biol. (2013) p.2-11
  • Yilmaz N., Yamada T., Greimel P., Uchihashi T., Ando T., Kobayashi T.; "Real-Time Visualization of Assembling of a Sphingomyelin-Specific Toxin"; Biophys. J. 105 (2013) p.1397-1405
  • Zhao J., Cai W., Shang G., Yao J.; "Oscillatory Motions of a Cantilever in High-Speed Atomic Force Microscopy in Constant-Height Mode"; Appl. Phys. Express 6 (2013)

Papers 2012:

  • Ando T.; "High-speed atomic force microscopy coming of age"; Nanotechnology 23 (2012) p.062001
  • Ando T., Kodera N.; "Visualization of mobility by atomic force microscopy", Methods Mol. Biol. 896 (2012) p.57-69
  • Ando T., Uchihashi T., Kodera N.; "High-speed atomic force microscopy", Jpn. J.
    Appl. Phys. 51 (2012)
  • Burns D., Fantner G., Youcef-Toumi K.; "Automatic lateral resonance identification from cantilever deflection information in high speed atomic force microscopy"; Proceedings of the American Control Conference (2012) DOI: 10.1109/ACC.2012.6315085
  • Casuso I., Khao J., Chami M., Paul-Gilloteaux P., Husain M., Duneau J.P., Stahlberg H., Sturgis J.N., Scheuring S.; "Characterization of the motion of membrane proteins using high-speed atomic force microscopy"; Nat Nanotechnol. (2012) p.525-529 DOI: 10.1038/nnano.2012.109
  • Colom A., Casuso I., Boudier T., Scheuring S.; "High-Speed Atomic Force Microscopy: Cooperative Adhesion and Dynamic Equilibrium of Junctional Microdomain Membrane Proteins"; J Mol Biol. (2012) p.249-256
  • Colom A., Casuso I., Boudier T., Rico F., Scheuring S.; "Direct Observation of Junctional Microdomain Assembly "; Biophysical Journal 102 3 (2012) p.297
  • Das S., Pota H., Petersen I.; "Resonant Controller for Fast Atomic Force Microscopy"; 51st IEEE Conference on Decision and Control, December 10-13, 2012. Maui, Hawaii, USA
  • Endo M., Miyazaki R., Emura T., Hidaka K., Sugiyama H.; " Transcription regulation system mediated by mechanical operation of a DNA nanostructure"; J Am Chem Soc. 134(6) (2012) p.2852-2855
  • Endo M., Tatsumi K., Terushima K., Katsuda Y., Hidaka K., Harada Y., Sugiyama H.; "Direct Visualization of the Movement of a Single T7 RNA Polymerase and Transcription on a DNA Nanostructure"; Angew. Chem. Int. Ed. 51 (2012) p.8778-8782
  • Endo M., Yang Y., Suzuki Y., Hidaka K., Sugiyama H.; "Single-molecule visualization of the hybridization and dissociation of photoresponsive oligonucleotides and their reversible switching behavior in a DNA nanostructure"; Angew Chem Int Ed Engl. 5 (2012) p.10518-10522
  • Erickson B., Coquoz S., Adams J., Burns D., Fantner G.; "Large-scale analysis of high-speed atomic force microscopy data sets using adaptive image processing"; Beilstein Journal of Nanotechnology ISSN 2190-4286 vol. 3 (2012) p.747-758
  • Fukuma T., Onishi K., Kobayashi N., Matsuki A., Asakawa H.; "Atomic-resolution imaging in liquid by frequency modulation atomic force microscopy using small cantilevers with megahertz-order resonance frequencies"; Nanotechnology 23 (2012) p.135706
  • Harniman R., Vicary J., Hörber J., Picco L., Miles M., Antognozzi M.; "Methods for imaging DNA in liquid with lateral molecular-force microscopy"; Nanotechnology vol 23 (2012)
  • Hu S., Mininni L., Hu Y., Erina N., Kindt J., Su C.; "High-speed atomic force microscopy and peak force tapping control"; Proceedings of the SPIE V.8324 (2012)
  • Huang P., Andersson S.; " Fast detection based on semi-transient signals in AFM"; American Control Conference (2012) p. 3216-3221
  • Husain M., Boudier T., Paul-Gilloteaux P., Casuso I., Scheuring S.; "Software for drift compensation, particle tracking and particle analysis of high-speed atomic force microscopy image series"; J Mol Recognit. (2012) p.292-298 DOI: 10.1002/jmr.2187
  • Igarashi K., Uchihashi T., Koivula A., Wada M., Kimura S., Penttilä M., Ando T., Samejima M.; "Visualization of cellobiohydrolase I from Trichoderma reesei moving on crystalline cellulose using high-speed atomic force microscopy", Methods Enzymol. 510 (2012) p.169-182
  • Iijima M., Somiya M., Yoshimoto N., Niimi T., Kuroda S.; "Nano-visualization of oriented-immobilized IgGs on immunosensors by high-speed atomic force microscopy"; Scientific Reports 2 790 (2012) p.1-5
  • Kenton B., Leang K.; "Design and Control of a Three-Axis Serial-Kinematic High-Bandwidth Nanopositioner"; IEEE/ASME Transactions on Mechatronics 17 (2012) p.356-369
  • Kim B., Boehm R.; "Force-Feedback High-Speed Atomic Force Microscope for Studying Large Biological Systems"; Micron 43.12 (2012) p.1372-1379
  • Lee D., Lee H., Lee N. S., Kim K. B., Seo Y.; "High-speed atomic force microscopy with phase-detection"; Applied Physics 12 (2012) p.989-994
  • Leitner M., Fantner G., Fantner E., Ivanova K., Ivanov T., Rangelow I., Ebner A., Rangl M., Tang J., Hinterdorfer P.; "Increased imaging speed and force sensitivity for bio-applications with small
    cantilevers using a conventional AFM setup"; Micron 43 (2012) p.1399-1407
  • Leung C., Bestembayeva A., Thorogate R., Stinson J., Pyne A., Marcovich Ch., Yang J., Drechsler U., Despont M., Jankowski T., Tschöpe M., Hoogenboom B.; "Atomic Force Microscopy with Nanoscale Cantilevers Resolves Different Structural Conformations of the DNA Double Helix"; NanoLetters (2012) DOI: 10.1021/nl301857p
  • Mahut M., Leitner M., Ebner A., Lämmerhofer M., Hinterdorfer P., Lindner W.; "Time-resolved chloroquine-induced relaxation of supercoiled plasmid DNA"; Anal Bioanal Chem. 402 2012) p.373-380
  • Mohri K., Nishikawa M., Takahashi N., Shiomi T., Matsuoka N., Ogawa K., Endo M., Hidaka K., Sugiyama H., Takahashi Y., Takakura Y.; "Design and development of nano-sized DNA assemblies in polypod-like structures as efficient vehicles for immunostimulatory CpG motifs to immune cells"; ACS Nano 6 7 (2012) p.5931-5940
  • Mori T., Hirose A., Hagiwara T., Ohtsuka M., Kakuta Y., Kimata K., Okahata Y.; "Single-molecular enzymatic elongation of hyaluronan polymers visualized by high-speed atomic force microscopy"; J. Am. Chem. Soc. 134 50 (2012) p.20254-20257
  • Nojima T., Konno H., Kodera N., Seio K., Taguchi H., Yoshida M.; "Nano-scale alignment of proteins on a flexible DNA backbone"; PLoS One 7 12 (2012) e52534
  • Nakata E., Fong L., Uwatoko C., Kiyonaka S., Mori Y., Katsuda Y., Endo M., Sugiyama H., Morii T.; "Zinc finger proteins as adaptor for locating proteins at specific addresses of DNA origami structures"; Angew Chem. Int. Ed. 51 (2012) p.2421-2424
  • Payton O., Picco L., Miles M., Homer M., Champneys A.; "Modelling oscillatory flexure modes of an atomic force microscope cantilever in contact mode whilst imaging at high speed"; Nanotechnology 23 (2012) p.265702
  • Payton O., Picco L., Miles M., Homer M., Champneys A.; "Improving the signal-to-noise ratio of high-speed contact mode atomic force microscopy"; Review of Scientific Instruments vol 83 (2012)
  • Payton O., Picco L., Robert D., Raman A., Homer M., Champneys A., Miles M.; "High-speed atomic force microscopy in slow motion - understanding cantilever behaviour at high scan velocities"; Nanotechnology 23 (2012) p.205704
  • Pleskova S., Aybeke E., Pudovkina E., Bourillot E., Lesniewska E.; "The study of monocytes and their submembrane structures by atomic force microscopy"; J. of Bio. Phys. and Chem. 12 4 (2012) p.168-173
  • Rajendran A., Endo M., Sugiyama H.; "Single-molecule analysis using DNA origami"; Angew. Chem. Int. 51 (2012) p.874-890
  • Rajendran A., Endo M., Sugiyama H.; "Structural and fuctional analysis of proteins by high-speed atomic force microscopy"; Adv. Protein Chem. Struct. Biol. 87 (2012) p.5-55
  • Rajendran A., Endo M., Sugiyama H.; "DNA origami: synthesis and self-assembly"; Curr. Protoc. Nucleic Acid Chem. 48 (2012) p.12.9.1-12.9.18
  • Santillan J., Itani T.; "An in situ analysis of the resist pattern formation process"; Proc. SPIE 8325 (2012) 83250P
  • Shlyakhtenko L., Lushnikov A., Miyagi A., Li M., Harris R., Lyubchenko Y.; "Nanoscale structure and dynamics of ABOBEC3G complexes with single-stranded DNA"; Biochemistry 51 32 (2012) p.6432-6440
  • Soltani Bozchalooi I., Youcef-Toumi K., Burns D., Fantner G.; "A vibration suppression approach to high-speed atomic force microscopy"; Proceedings of the American Control Conference (2012) DOI: 10.1109/ACC.2012.6315281
  • Suzuki Y., Shin M., Yoshida A., Yoshimura S., Takeyasu K.; "Fast microscopical dissection of action scenes played by Escherichia coli RNA polymerase"; FEBS Letters 586 (2012) p.3187-3192
  • Tuma T., Lygeros J., Kartik V., Sebastian A., Pantazi A.; "High-speed multiresolution scanning probe microscopy based on Lissajous scan trajectories"; Nanotechnology 23 (2012) p.185501
  • Uchihashi T., Kodera N., Ando T.; "Guide to video recording of structure dynamics and dynamic processes of proteins by high-speed atomic force microscopy", Nature Protocols 7 (6) (2012) p.1193-1206
  • Wickham S., Bath J., Katsuda Y., Endo M., Hidaka K., Sugiyama H., Tuberfield A.; "DNA-based molecular motor that can navigate a network of tracks"; Nature Nanotechnol. 7 (2012) p.169-173
  • Yamashita H., Taoka A., Uchihashi T., Asano T., Ando T., Fukumori Y.; "Single molecule imaging on living bacterial cell surface by high-speed AFM"; J. Mol. Biol. 422 (2012) p.300-309
  • Yang Y, Endo M., Hidaka K., Sugiyama H.; "Photo-controllable DNA origami nanostructures assembling into predesigned multiorientational patterns"; J. Am. Chem. Soc. 134 51 (2012) p.20645-20653
  • Yong Y., Moheimani S.; "A Z-scanner design for high-speed scanning probe microscopy"; Proceedings of IEEE International Conference on Robotics and Automation (2012) p. 4780-4785
  • Yoshidome T., Endo M., Kashiwazaki G., Hidaka K., Bando T., Sugiyama H.; "Sequence-selective single molecule alkylation with a pyrrole-imidazole polyamide visualized in a DNA nanoscaffold"; J. Am. Chem. Soc. 134 (2012) p.4654-4660

Papers 2011:

  • Burns D., Youcef-Toumi K., Fantner G.; "Indirect Identification and Compensation of Lateral Scanner Resonances in Atomic Force Microscopes" Nanotechnology 22 31 (2011)
  • Casuso I., Rico F., Scheuring S.; "High-speed atomic force microscopy: Structure and dynamics of single proteins"; Curr Opin Chem Biol. (2011) p.704-709
  • Casuso I., Rico F., Scheuring S.; " Biological AFM: where we come from--where we are--where we may go"; J. Mol. Recognit. 24 3 (2011) p.406-413
  • Chang P., Huang P., Maeng J., Andersson S.; "Local raster scanning for high-speed imaging of biopolymers in atomic force microscopy"; Rev. Sci. Instrum. 82 (2011) p.063703
  • Enning R., Ziegler D., Nievergelt A., Friedlos R, Venkataramani K., Stemmer A.; "A high frequency sensor for optical beam deflection atomic force microscopy"; Review of Scientific Instruments 82 (2011) p.043705
  • Endo M., Sugita T., Rajendran A., Katsuda Y., Emura T., Hidaka K., Sugiyama H.; "Two-dimensional DNA origami assemblies using four-way connector"; Chem. Commun. 47 (2011) p.3213
  • Endo M., Hidaka K., Sugiyama H.; "Direct AFM observation of an opening event of a DNA cuboid constructed via a prism structure"; Org. Biomol. Chem. 9 (2011) p.2075
  • Fleming A.; "Dual-Stage Vertical Feedback for High-Speed Scanning Probe Microscopy"; IEEE Transactions on Control Systems Technology Vol. 19 (2011)
  • Humphris A., Zhao B., Catto D., Howard-Knight J., Kohli P., Hobbs J.; "High speed nano-metrology"; Review of Scientific Instruments 82 (2011) p.043710
  • Igarashi K., Uchihashi T., Koivula A., Wada M., Kimura S., Okamoto T., Penttilä M., Ando T., Samejima M.; "Traffic Jams Reduce Hydrolytic Efficiency of Cellulase on Cellulose Surface"; Science 333 (2011) p.1279-1282
  • Inoue S., Uchihashi T., Yamamoto D., Ando T.; "Direct Observation of Surfactant Aggregate Behavior on a Mica Surface using High-Speed Atomic Force Microscopy"; Chemical Communications 47 (2011) p.4974-4976
  • Katan A., Dekker C.; "High-Speed AFM Reveals the Dynamics of Single Biomolecules at the Nanometer Scale";Cell 147 (2011) p.979-982
  • Kitazawa M., Ito S., Yagi A., Sakai N., Uekusa Y., Ohta R., Inaba K., Hayashi A.,
    Hayashi Y., Tanemura M.; "High-Resolution Imaging of Plasmid DNA in Liquids
    in Dynamic Mode Atomic Force Microscopy Using a Carbon Nanofiber Tip";
    Japanese Journal of Applied Physics 50 (2011)
  • Kenton B., Fleming A., Leang K.; "A compact ultra-fast vertical nanopositioner for improving scanning probe microscope scan speed"; Review of Scientific Instruments 82 (2011) p.123703
  • Laisne A., Ewald M., Ando T., Lesniewska E., Pompon D.; "Self-assembly properties and dynamic of synthetic proteo-nucleic building blocks in solution and on surfaces"; Bioconjugate Chem. 22 (2011) p.1824-1834
  • Lyubchenko Y., Shlyakhtenko L., Ando T.; "Imaging of nucleic acids with atomic force microscopy", Methods 54 (2011) p.274-283
  • Miyagi A., Ando T., Lyubchenko Y. L.; "Dynamics of nucleosomes assessed with time-lapse high speed atomic force microscopy"; Biochemistry 50 (2011) p.7901-790
  • Rajendran A., Endo M., Katsuda Y., Hidaka K., Sugiyama H.; "Programmed two-dimensional self-assembly of multiple DNA origami jigsaw pieces"; ACS Nano 5 1 (2011) p.665-671
  • Rajendran A., Endo M., Katsuda Y., Hidaka K., Sugiyama H.; "Photo-cross-linking-assisted thermal stability of DNA origami structures and its application for higher-temperature self-assembly"; J. Am. Chem. Soc. 133 37 (2011) p.14488-14491
  • Richter C., Burri M., Sulzbach T., Penzkofer C., Irmer B.; "Ultrashort cantilever probes for high speed atomic force microscopy", SPIE Newsroom (2011)
  • Rutten P.; "High speed two-dimensional optical beam position detector"; Review of Scientific Instruments 82 (2011) p.073705
  • Sanchez H., Suzuki Y., Yokokawa M., Takeyasu K., Wyman C.;"Protein-DNA interactions in high speed AFM: single molecule diffusion analysis of human RAD54"; Integrative Biology 3 (2011) p.1127-1134
  • Shibata M., Uchihashi T., Yamashita H., Kandori H., Ando T.; "Structural changes in bacteriorhodopsin in response to alternate illumination observed by high-speed atomic force microscopy"; Angewande Chemie International edition 50 (2011) p.4410-4413
  • Soltani Bozchalooi I., Youcef-Toumi K., Burns D., Fantner G.; "Compensator design for improved counterbalancing in high speed atomic force microscopy"; Review of Scientific Instruments ISSN 0034-6748 vol. 82 num. 11 (2011) p.113712
  • Suzuki A., Hori T., Nishino T., Usukura J., Miyagi A., Morikawa K., Fukagawa T.; " Spindle microtubules generate tension-dependent changes in the distribution of inner kinetochore proteins"; J. Cell Biol. 193 (2011) p.125-140
  • Suzuki Y., Yoshikawa Y., Yoshimura S., Yoshikawa K., Takeyasu K.; "Unraveling DNA dynamics using atomic force microscopy"; Wiley Interdiscip. Rev. Nanomed. Nanobiotechnol. 3 6 (2011) p.574-588
  • Suzuki Y., Gilmore J., Yoshimura S., Henderson R., Lyubchenko Y., Takeyasu K.; "Visual Analysis of Concerted Cleavage by Type IIF Restriction Enzyme SfiI in Subsecond Time Region"; Biophys. J. 101 (2011) p.2992-2998
  • Uchihashi T., Ando T., "High-speed atomic force microscopy and biomolecular processes"; Methods Mol. Biol. 736 (2011) p.285-300
  • Uchihashi T., Iino R., Ando T., Noji H.; "High-speed atomic force microscopy reveals rotary catalysis of rotorless F1-ATPase"; Science 333 (2011) p.755-758
  • Wickham S., Endo M., Katsuda Y., Hidaka K., Bath J., Sugiyama H., Turberfield A.; "Direct observation of stepwise movement of a synthetic molecular transporter"; Nature Nanotechnol. 6 (2011) p.166-169
  • Yamamoto S.-I., Okada T., Uraoka Y., Yamashita I., Hasegawa S.; "Static and dynamic observation of supermolecular protein, ferritin, using high-speed atomic force microscope"; J. Appl. Phys. 109 (2011) p.034901
  • Yokokawa M., Takeyasu K.; "Motion of the Ca2+-pump captured"; FEBS J. 278 (2011) p.3025-3031
  • Zhang Y., Fang Y., Yu J., Dong X.; "Note: A Novel Atomic Force Microscope Fast Scanning Approach: Variable Speed Scanning"; Review of Scientific Instrument 82 (2011) p.056103

Papers 2010:

  • Braunsmann Ch., Schäffer T.E.; "High-speed atomic force microscopy for large scan sizes using small cantilevers"; Nanotechnology 21 (2010) p.225705
  • Casuso I., Sens P., Rico F., Scheuring S.; "Experimental Evidence for Membrane-Mediated Protein-Protein Interaction"; Biophys. J. 99 (2010) L47-L49
  • Degertekin F., Torun H.; "Comment on "MEMS-based high speed scanning probe microscopy" [Rev. Sci. Instrum. 81, 043702 (2010)]", Rev. Sci. Instrum. 81 (2010)
  • Disseldorp E., Tabak F., Katan A., Hesselberth M., Oosterkamp T., Frenken J., van Spengen W.; " MEMS-based high speed scanning probe microscopy"; Rev. Sci. Instrum. 81 (2010) p.043702
  • Endo M., Katsuda Y., Hidaka K., Sugiyama H.; "A Versatile DNA Nanochip for Direct Analysis of DNA Base-Excision Repair"; Angew. Chem. Int. Ed. 49 (2010) p.9412-9416
  • Endo M., Katsuda Y., Hidaka K., Sugiyama H.; "Regulation of DNA Methylation Using Different Tensions of Double Strands Constructed in a Defined DNA Nanostructure"; J. Am. Chem. Soc. 132 (2010) p.1592-1597
  • Endo M., Sugita T., Katsuda Y., Hidaka K., Sugiyam H.; "Inside Cover: Programmed-Assembly System Using DNA Jigsaw Pieces"; Chem. Eur. J. 16 (2010) p.5362-5368
  • Fantner G.E., Barbero R.J., Gray D.S., Belcher A.M.; "Kinetics of antimicrobial peptide activity measured on individual bacterial cells using high-speed atomic force microscopy"; Nature Nanotechnology 5 (2010) p.280-285
  • Fleming A., Kenton B., Leang K.; "Bridging the gap between conventional and video-speed scanning probe microscopes"; Ultramicroscopy 110 (2010) p.1205-1214
  • Giocondi M.-C., Yamamoto D., Lesniewska E., Milhiet P.-E., Ando T., Le Grimellec C.; "Surface topography of membrane domains"; Biochim. Biophys. Acta.-Biomembranes 1798 (2010) p.703-718
  • Hinterdorfer P.; "High Speed Bio-AFM Reveals Motion of Membrane Proteins Driven by Hydrophobic Mismatch with nm Precision in Label-Free Fashion"; Biophys J. 99(7) (2010) p.2017
  • Itani T., Santillan J.; "Dissolution Behavior of Photoresists: An In-situ Analysis"; J. Photopolym. Sci. Technol. 23 (2010) p.639
  • Itani T. Santillan J.; "In situ Characterization of Photoresist Dissolution"; Appl. Phys. Express 3 (2010) p.061601
  • Kasai N., Ramanujan C., Fujimoto I., Shimada A., Ryan J., Torimitsu K.; "AFM observation of single, functioning ionotropic glutamate receptors reconstituted in lipid bilayers"; Biochimica et Biophysica Acta 1800 (2010) p.655-661
  • Kodera N., Yamamoto D., Ishikawa R., Ando T.; "Video imaging of walking myosin V by high-speed atomic force microscopy"; Nature 468 (2010) p.72-76
  • Li Y. J., Takahashi K., Kobayashi N., Naitoh Y., Kageshima M., Sugawara Y.; "Multifrequency High-Speed Phase-Modulation Atomic Force Microscopy"; Ultramicroscopy Vol.110 (2010) p.582
  • Milhiet P.-E., Yamamoto D., Berthoumieu O., Dosset P., Le Grimellec C., Verdier J.-M., Marchal S., Ando T.; "Deciphering the structure, growth and assembly of amyloid-like fibrils using high-speed atomic force microscopy"; PLos One 5 (2010) e1324
  • Rajendran A., Endo M., Katsuda Y., Hidaka K., Sugiyama H.; "Programmed Two-Dimensional Self-Assembly of Multiple DNA Origami Jigsaw Pieces"; ACS Nano 5 (2010) p.665-671
  • Salem F.; "Ultra-High Speed Atomic Force Microscopy: video-rate and beyond"; ISCAS IEEE (2010) p.1197-1200
  • Sannohe Y., Endo M., Katsuda Y., Hidaka K., Sugiyama H.; "Visualization of Dynamic Conformational Switching of the G-Quadruplex in a DNA Nanostructure"; J. Am. Chem. Soc. 132 (2010) p.16311-16313
  • Shibata M., Yamashita H., Uchihashi T., Kandori H., Ando T.; "High-speed atomic force microscopy shows dynamic molecular processes in photo-activated bacteriorhodopsin"; Nature Nanotechnology 5 (2010) p.208-212
  • Shinohara K., Kodera N.,Oohashi T.; "Single-Molecule Imaging of Photodegradation Reaction in a Chiral Helical π-Conjugated Polymer Chain"; Polymer Chemistry 48 (2010) p.4103-4107
  • Shinozaki Y., Sumitomo K., Furukawa K., Miyashita H., Tamba Y., Kasai N., Nakashima H., Torimitsu K.; "Visualization of Single Membrane Protein Structure in Stretched Lipid Bilayer Suspended over Nanowells"; Appl. Phys. Express 3 (2010) p.027002
  • Sugimoto S., Yamanaka K., Nishikori S., Miyagi A., Ando T., Ogura T.; "AAA+ chaperone ClpX regurates dynamics of prokaryotic cytoskeletal protein FtsZ"; J. Biol. Chem. 285 (2010) p.6648-6657
  • Suzuki Y., Higuchi Y., Hizume K., Yokokawa M., Yoshimura S., Yoshikawa K., Takeyasu K.; "Molecular dynamics of DNA and nucleosomes in solution studied by fast-scanning atomic force microscopy"; Ultramicroscopy 110 (2010) p.682-688
  • Tabak F., Disseldorp E., Wortel G., Katan A., Hesselberth M., Oosterkamp T., Frenken J., van Spengen W.; "MEMS-based fast scanning probe microscopes"; Ultramicroscopy 110 (2010) p.599-604
  • Tanaka F., Mochizuki T., Liang X., Asanuma H., Tanaka S., Suzuki K., Kitamura S., Nishikawa A., Ui-Tei K., Hagiya M.; "Robust and Photocontrollable DNA Capsules Using Azobenzenes"; Nano Lett. 10 (2010) p.3560-3565
  • Yamamoto D., Taoka A., Uchihashi T., Sasaki H., Watanabe H., Ando T., Fukumori Y.; "Visualization and structural analysis of the bacterial magnetic organelle magnetosome using atomic force microscopy"; Proc. Natl. Acad. Sci. USA 107 (2010) p.9382-9387
  • Yamamoto D., Uchihashi T., Kodera N., Yamashita H., Nishikori S., Ogura T., Shibata M., Ando T.; "High-speed atomic force microscopy techniques for observing dynamic biomolecular processes"; Methods Enzymol. 475 (2010) p.541-564
  • Yokokawa M., Carnally S., Henderson R., Takeyasu K., Edwardson J.; "Acid-sensing ion channel (ASIC) 1a undergoes a height transition in response to acidification"; FEBS Lett. 584 (2010) p.3107-3110

Papers 2009:

  • Casuso I., Kodera N., Le Grimellec C., Ando T., Scheuring S.; "Contact mode high-resolution high-speed atomic force microscopy movies of purple membrane"; Biophys Journal 97 (2009) p.1354-1361
  • Carberry D., Picco L., Dunton P., Miles M.; "Mapping real-time images of High-Speed AFM using multitouch control"; Nanotechnology 20 (2009) p.434018
  • Clayton G., Tien S., Leang K., Zou Q., Devasia S.; "A Review of Feedforward Control Approaches in Nanopositioning for High-Speed SPM"; Journal of Dynamic Systems, Measurement and Control Vol. 131 (2009) 061101-1-19
  • Endo M., Hidaka K., Kato T., Namba K., Sugiyama H.; "DNA Prism Structures Constructed by Folding of Multiple Rectangular Arms"; J. Am. Chem. Soc. 131 (2009) p.15570-15571
  • Endo M., Sugiyama H.; "Chemical Approaches to DNA Nanotechnology"; ChemBioChem 10 (2009) p.2420
  • Endo M., Sugiyama H.; "Three-dimensional DNA nanostructures constructed by folding of multiple rectangles"; Nucleic Acids Symp. Ser. 53 (2009) p.81
  • Fantner G., Burns D., Belcher A., Rangelow I., Youcef-Toumi K.; "DMCMN: In Depth Characterization and Control of AFM Cantilevers With Integrated Sensing and Actuation"; Journal of Dynamic Systems Measurement and Control-Transactions of the Asme 131 6 (2009)
  • Gilmore J., Suzuki Y., Tamulaitis G., Siksnys V., Takeyasu K., Lyubchenko Y.; "Single-Molecule Dynamics of the DNA−EcoRII Protein Complexes Revealed with High-Speed Atomic Force Microscopy"; Biochemistry 48 (2009) p.10492-10498
  • Igarashi K., Koivula A., Wada M., Kimura S., Penttilä M., Samejima M.; "High Speed Atomic Force Microscopy Visualizes Processive Movement of Trichoderma reesei Cellobiohydrolase I on Crystalline Cellulose"; The Journal of Biological Chemistry 284 (2009) p.36186-36190
  • Leang K., Fleming A.; "High-Speed Serial-Kinematic SPM Scanner: Design and Drive Considerations"; Asian Journal of Control 11 (2009) p.144-153
  • Lyubchenko Y., Shlyakhtenko L., Gall A.; "Atomic force microscopy imaging and probing of DNA, proteins, and protein DNA complexes: silatrane surface chemistry"; Methods Mol Biol. 543 (2009) p.337-351
  • Lyubchenko Y., Shlyakhtenko L.; "AFM for analysis of structure and dynamics of DNA and protein-DNA complexes"; Methods Mol Biol. 47 (2009) p.206-213
  • Pyne A., Marks W., Picco L., Dunton P., Ulcinas A., Barbour M., Jones S., Gimzewski J., Miles M.; "High-Speed Atomic Force Microscopy of dental enamel dissolution in citric acid"; Archives of Histology and Cytology Vol 72 (2009) p.209-215
  • Shinohara K., Kodera N., Ando T.; "Single-molecule imaging of a micro-Brownian motion of a chiral helical π-conjugated polymer as a molecular spring driven by thermal fluctuations"; Chem Lett. 38 (2009) p.690-691
  • Shinozaki Y., Sumitomo K., Tsuda M., Koizumu S., Inoue K., Torimitsu K.; "Direct Observation of ATP-Induced Conformational Changes in Single P2X4 Receptors"; PLoS Biol. 7 (2009) e1000103
  • Shlyakhtenko L., Lushnikov A., Lyubchenko Y.; "Dynamics of Nucleosomes Revealed by Time-Lapse Atomic Force Microscopy"; Biochemistry 48 (2009) p.7842-7848
  • Vicary J.A., Miles M.J.; "Real-time nanofabrication with high-speed atomic force microscopy"; Nanotechnology 20 (2009) p.095302
  • Yamamoto D., Nagura N., Omote S., Taniguchi M., Ando T.; "Streptavidin 2D crystal substrates for visualizing biomolecular processes by atomic force microscopy"; Biophys. J. 97 (2009) p.2358-2367
  • Yamashita H., Voïtchovsky K., Uchihashi T., Antoranz Contera S., Ryan J. F., Ando T.; "Dynamics of bacteriorhodopsin 2D crystal observed by high-speed atomic force microscopy"; J. Struct. Biol. 167 (2009) p.153-158
  • Zhao B., Howard-Knight J.P., Humphris A.D.L., Kailas L., Ratcliffe E.C., Foster S.J., Hobbs J.K.; "Large scan area high-speed atomic force microscopy using a resonant scanner"; Rev. Sci. Instrum. 80 (2009) p.093707

Papers 2008:

  • Ando T.; "Control techniques in high-speed atomic force microscopy"; Proceedings of the American Control Conference art. no. 4586984 (2008) p.3194-3200
  • Ando T., Uchihashi T., Fukuma T.; "High-speed atomic force microscopy for nano-visualization of dynamic biomolecular processes"; Prog. Surf. Sci. (2008) p.337-437
  • Ando T., Uchihashi T., Kodera N., Yamamoto D., Miyagi A., Taniguchi M., Yamashita H.; "High-speed AFM and nano-visualization"; Eur J Physiol 456 (2008) p.211-225
  • Ando T.; "Observation of the protein molecule by HS-AFM"; Applied Physics 77 (2008) p.1181
  • Antognozzi M., Ulcinas A., Picco L., Simpson S., Heard P., Szczelkun M., Brenner B., Miles M.; "A new detection system for extremely small vertically mounted cantilevers"; Nanotechnology Vol. 19 (38) (2008) p.384002
  • Fukuma T., Okazaki Y., Kodera N., Uchihashi T., Ando T.; "High resonance frequency force microscope scanner using inertia balance support"; Appl. Phys. 92 (2008) p.243119
  • Hoogenboom B.W., Frederix P.L.T.M., Fotiadis D., Hug H.J., Engel A.; "Potential of interferometric cantilever detection and its application for SFM/AFM in liquids"; Nanotechnology 19/38 (2008)
  • Li Y. J., Kobayashi N., Nomura H., Naitoh Y., Kageshima M., Sugawara Y.; "High-speed Phase-Modulation Atomic Force Microscopy (PM-AFM) in Constant-Amplitude (CA) Mode Capable of Simultaneous Measurement of Topography and Energy Dissipation"; Jpn. J. Appl. Phys. vol. 47 No. 7B (2008) p.6121-6124
  • Miyagi A., Tsunaka Y., Uchihashi T., Mayanagi K., Hirose S., Morikawa K., Ando T.; "Visualization of intrinsically disordered regions of proteins by high-speed atomic force microscopy"; Chem. Phys. Chem. 9 (2008) p.1859-1866
  • Picco, L.M., Dunton, P.G., Ulcinas, A., Engledew, D.J., Hoshi, O., Ushiki, T., Miles, M.J.; "High-speed AFM of human chromosomes in liquid"; Nanotechnology, Vol. 19 (2008) p.384018
  • Shinohara K., Kodera N., Ando T.; "Direct observation of single molecules in a π-conjugated polymer: High-Speed AFM imaging of two-molecular dynamic interaction in a chiral helical !-conjugated polymer"; Polymer Preprints 57 (2008) p.1679
  • Shinozaki Y., Siitonen A., Sumitomo K., Furukawa K., Torimitsu K.; "Effect of Ca2+ on Vesicle Fusion on Solid Surface: An In vitro Model of Protein-Accelerated Vesicle Fusion"; Japan. J. Appl. Phy s. 47 (2008) p.6164
  • Sugasawa H., Sugiyama Y., Morii T., Okada T.; "Dynamic Observation of 2686 bp DNA-BAL 31 Nuclease Interaction with Single Molecule Level Using High-Speed Atomic Force Microscopy"; Japan. J. Appl. Phys. 47 (2008) p.6168-6172
  • Tien S., Devasia S.; "AFM Imaging of Large Soft Samples in Liquid Medium Using Iterative Inverse Feedforward Control"; Proceedings of the 2008 American Control Conference (2008) p.3201-3206
  • Vicary, J., Miles, M.; "Pushing the boundaries of local oxidation nanolithography: Short timescales and high speeds"; Ultramicroscopy Vol. 108 Proceedings of the Ninth International Conference on Scanning Probe Micrososcopy, Sensors and Nanostructures (2008) p.1120-1123
  • Wu Y., Zou Q., Su C.; "A current cycle feedback iterative learning control approach to AFM imaging"; Proceedings of the 2008 American Control Conference 2008 (2008) p. 2040-2045
  • Yamamoto D., Uchihashi T., Kodera N., Ando T.; "Anisotropic diffusion of point defects in two-dimensional crystal of streptavidin observed by high-speed atomic force microscopy"; Nanotechnol. 19 (2008) p.384009

Papers 2007:

  • Ando T., Uchihashi T., Kodera N., Yamamoto D., Taniguchi M., Miyagi A., Yamashita H.; "Review: High-speed atomic force microscopy for observing dynamic biomolecular processes"; J. Mol. Recognit. 20 (2007) p.448-458
  • Crampton N., Yokokawa M., Dryden D.T.F., Edwardson J.M., Rao D.N., Takeyasu K., Yoshimura S.H., Henderson R.M.; "Fast-scan atomic force microscopy reveals that the type III restriction enzyme EcoP15I is capable of DNA translocation and looping"; PNAS 104 (2007) p.12755-12760
  • Ding L., Li Y., Chu H., Li C., Yang Z., Zhou W., Tang Z. K. ; "High speed atomic force microscope lithography driven by electrostatic interaction"; Appl. Phys. Lett. 91 (2007) p.023121
  • Kobayashi M., Sumitomo K., Torimitsu K.; "Real-time imaging of DNA-streptavidin complex formation in solution using a high-speed atomic force microscope"; Ultramicroscopy Volume 107 Issues 2-3 (2007) p.184-190
  • Li M., Tang H., Roukes M., "Ultra-sensitive NEMS-based cantilevers for sensing, scanned probe and very high-frequency applications"; Nature Nanotechnology 2 (2007) p.114-120
  • Morita S., Yamada H., Ando T.; "Japan AFM roadmap 2006"; Nanotechnol. 18 (2007) p.08401
  • Picco L.M., Bozec L., Ulcinas A., Engledew D.J., Antognozzi M., Horton M.A., Miles M.J.; "Breaking the speed limit with atomic force microscopy"; Nanotechnology 18/4 (2007)
  • Schitter G., Astrom K.J., DeMartini B.E., Thurner P.J., Turner K.L., Hansma P.K.; "Design and modeling of a high-speed AFM-scanner"; IEEE Transactions on Control Systems Technology 15/5 (2007)
  • Shinohara K., Kodera N., Ando T.; "Single molecular imaging of a micro-Brownian motion and a bond scission of a supramolecular chiral π-conjugated"; Chem. Lett. 36 (2007) p.1378-1379
  • Ulcinas A., Butler M., Heppenstall-Butler M., Singleton S., Miles M.; "Direct observation of spherulitic growth stages of CaCO3 in a poly(acrylic acid)-chitosan system: In situ SPM study"; J. Cryst. Growth 307 (2007) p.378
  • Yamashita H., Uchihashi T., Kodera N., Miyagi A., Yamamoto D., Ando T.; "Tip-sample distance control using photo-thermal actuation of a small cantilever for high-speed atomic force microscopy"; Rev. Sci. Instrum. 78 (2007) p.083702

Papers 2006:

  • Ando T., Uchihashi T., Kodera N., Miyagi A., Nakakita R., Yamashita H., Sakashita M.; "High-speed atomic force microscopy for studying the dynamic behavior of protein molecules at work"; Jpn. J. Appl. Phys. 45 (2006) p.1897-1903
  • Fantner G., Schitter G., Kindt J., Ivanov T., Ivanova K., Patel R., Holten-Andersen N., Adams J., Thurner P., Rangelow I., Hansma P.; "Components for high speed atomic force microscopy"; Ultramicroscopy (2006)
  • Fukuma T., Kilpatrick J., Jarvis S.; "Phase modulation atomic force microscope with true atomic resolution"; Rev. Sci. Instrum. Vol. 77 (2006) p.123703
  • Hansma P.K., Schitter G., Fantner G.E., Prater C.; "High-speed atomic force microscopy"; Science 314 (2006) p.601-602
  • Hoogenboom B.W., Hug H.J., Pellmont Y., Martin S.; "Quantitative dynamic-mode scanning force microscopy in liquid"; Appl. Phys. Lett. 88 (2006) p.193109
  • Kageshima M., Togo S., Li Y. J., Naitoh Y., Sugawara Y.; "Wide-band and hysteresis-free regulation of piezoelectric actuator based on induced current for high-speed scanning probe microscopy"; Rev. Sci. Instrum. Vol. 77 (2006) p.103701
  • Kodera N., Sakashita M., Ando T.; "Dynamic proportional-integral-differential controller for high-speed atomic force microscopy"; Rev. Sci. Instrum. 77 (2006) p.083704
  • Koide H., Kinoshita T., Tanaka Y., Tanaka S., Nagura N., Meyer zu Hörste G., Miyagi A., Ando T.; "Identification of the Single Specific IQ Motif of Myosin V from Which Calmodulin Dissociates in the Presence of Ca2 +"; Biochemistry 45 (2006) p.11598-11604
  • Schäffer T.E.; "High-speed atomic force microscopy of biomolecules in motion"; in "Force Microscopy: Applications in Biology and Medicine", B. Jena, H. Hörber, eds., WILEY-VCH Verlag, Weinheim, ISBN 0-471-39628-1, (2006) p.221-247
  • Schitter G., Astrom K., DeMartini B., Fantner G., Turner K., Thurner P., Hansma P.; "Design and modeling of a high-speed scanner for atomic force microscopy"; 2006 American Control Conference ISSN 0743-1619 vol. 1-12 (2006) p. 502-507
  • Uchihashi T., Kodera N., Itoh H., Yamashita H., Ando T.; "Feed-forward control for high-speed AFM imaging of biomolecules"; Jpn. J. Appl. Phys. 45 (2006) p.1904-1908
  • Uchihashi T., Yamashita H., Ando T.; "Fast phase imaging in liquids using a rapid scan atomic force microscope"; Appl. Phys. Lett. 89 (2006) p.213112
  • Yokokawa M., Wada C., Ando T., Sakai N., Yagi A., Yoshimura S.H., Takeyasu K.; "Fast-scanning atomic force microscopy reveals the ATP/ADP-dependent conformational changes of GroEL"; EMBO J. 25(2006) p.4567-4576
  • Yokokawa M., Yoshimura S.H., Naito Y., Ando T., Yagi A., Sakai N., Takeyasu K.; "Fast-scanning atomic force microscopy reveals the molecular mechanism of DNA cleavage by ApaI endonuclease"; IEE Proc Nanobiotechnol. 153 (2006) p.60-66

Papers 2005:

  • Ando T., Uchihashi T., Kodera N., Miyagi A., Nakakita R., Yamashita H., Matada K.; "High-speed AFM for studying the dynamic behavior of protein molecules at work"; e-J. Surf. Sci. Nanotechnol. 3 (2005) p.384-392
  • Anwar M., Rousso I.; "Atomic force microscopy with time resolution of microseconds"; Appl. Phys. Lett. 86 (2005) p.014101
  • Fantner G.E., Hegarty P., Kindt J.H., Schitter G., Cidade G.A.G., Hansma P.K.; "Data acquisition system for high speed atomic force microscopy"; Rev. Sci. Instrum. 76 (2005) p.026118
  • Fukuma T.,Kimura K., Kobayashi K., Matsushige K., Yamada H.; "Frequency-Modulation Atomic Force Microscopy at High Cantilever Resonance Frequencies using the Heterodyne Optical Beam Deflection Method"; Rev. Sci. Instrum. 76 (2005) p.126110
  • Hobbs J., Vasilev C., Humphris A.; "Real time observation of crystallization in polyethylene oxide with video rate atomic force microscopy"; Polymer 46 (2005) p.10226
  • Hoogenboom B.W., Frederix P.L.T.M., Hug H.J.; "Interferometer-based AFM for measuring with small cantilevers"; GIT Imaging & Microscopy 2 (2005) p.36-38
  • Hoogenboom B. W., Frederix P. L. T. M., Yang J. L., Martin S., Pellmont Y., Steinacher M., Zäch S., Langenbach E., Heimbeck H.-J., Engel A., Hug H. J.; "A Fabry-Perot interferometer for micrometer-sized cantilevers"; Appl. Phys. Lett. 86 (2005) p.074101
  • Humphris A.D.L., Miles M.J., Hobbs J.K.; "A mechanical microscope: High-speed atomic force microscopy"; Appl. Phys. Lett. 86 (2005) p.034106
  • Kodera N., Yamashita H., Ando T.; "Active damping of the scanner for high-speed atomic force microscopy"; Rev. Sci. Instrum. 76 (2005) p.053708
  • Rost M.J., Crama L., Schakel P., van Tol E., van Velzen-Williams G.B.E.M., Overgauw C.F., ter Horst H., Dekker H., Okhuijsen B., Seynen M., Vijftigschild A., Han P., Katan A.J., Schoots K., Schumm R., van Loo W., Oosterkamp T.H., Frenken J.W.M; "Scanning probe microscopes go video rate and beyond"; Rev. Sci. Instrum. 76 (2005) p.053710
  • Schäffer T.E., Fuchs H.; "Optimized detection of normal vibration modes of atomic force microscope cantilevers with the optical beam deflection method"; Journal of Applied Physics 97 (2005) 083524
  • Schitter G., Fantner G.E., Kindt J.H., Thurner P.J., Hansma P.K.; "On recent developments for high-speed atomic force microscopy"; Proceedings of the 2005 IEEE/ASME International Conference on Advanced Intelligent Mechatronics Monterey, California, USA, 24-28 July, 2005
  • Tien, S., Qingze Zou, Devasia, S. ; "Iterative control of dynamics-coupling-caused errors in piezoscanners during high-speed AFM operation"; Control Systems Technology, IEEE Transactions issue 6 (2005) p.921-931
  • Yang J. L., Despont M., Drechsler U., Hoogenboom B. W., Frederix P. L. T. M., Martin S., Engel A., Vettiger P., Hug H. J.; "Miniaturized single-crystal silicon cantilevers for scanning force microscopy"; Appl. Phys. Lett. 86 (2005) p.134101

Papers 2004:

  • Fukuma T., Kimura K., Kobayashi K., Yamada H., Matsushige K.; "Dynamic Force Microscopy at High Cantilever Resonance Frequencies using Heterodyne Optical Beam Deflection Method"; Appl. Phys. Lett 85 (2004) p.6287-6289
  • Gutsmann T., Fantner G., Kindt J., Venturoni M., Danielsen S., Hansma P.; "Force spectroscopy of collagen fibers to investigate their mechanical properties and structural organization"; Biophy. J. 86 (2004) p.3186
  • Kindt J.H., Fantner G.E., Cutroni J.A., Hansma P.K.; "Rigid design of fast scanning probe microscopes using finite element analysis"; Ultramicroscopy 100/3-4 (2004) p.259-265
  • Kindt J.H., Fantner G.E., Thompson J.B., Hansma P.K.; "Automated wafer-scale fabrication of electron beam deposited tips for atomic force microscopes using pattern recognition"; Nanotechnology 15 (2004) p.1131-1134
  • Kodera N., Kinoshita T., Ito T., Ando T.; "High-resolution imaging of myosin motor in action by a high-speed atomic force microscope"; Adv. Exp. Med. Biol. 538 (2003) p.119-127
  • Schitter G., Allgöwer F., Stemmer A.; "A new control strategy for high-speed atomic force microscopy "; Nanotechnology volume 15 issue 1 (2004)
  • Schitter G., Stark R.W., Stemmer A.; "Fast contact-mode atomic force microscopy on biological specimen by model-based control" Ultramicroscopy 100 (2004) p.253-257
  • Schitter G., Stemmer A.; "Identification and open-loop tracking control of a piezoelectric tube scanner for high-speed scanning-probe microscopy"; Control Systems Technology, IEEE Transactions issue 3 (2004) p.449-454
  • Tien S., Zou Q., Devasia, S. ; "Control of dynamics-coupling effects in piezo-actuator for high-speed AFM operation"; American Control Conference 2004 Proceedings of the 2004 volume 4 (2004) p.3116-3121
  • Zou Q., Leang K.K., Sadoun E., Reed M.J., Devasia S.; "Control issues in high-speed AFM for biological applications: collagen imaging example"; Asian J Control. (2004) p.164-178

Papers 2003:

  • Ando T., Kodera N., Naito Y., Kinoshita T., Furuta K., Toyoshima Y.; "A high-speed atomic force microscope for studying biological macromolecules in action"; Chem. Phys. Chem. 4 (2003) p.1196-1202
  • Humphris A., Hobbs J., Miles M.; "Ultra high-speed scanning near-field optical microscopy capable of over 100 frames per second"; Appl. Phys. Lett. 83 (2003) p.6
  • Kim Y., Nam H., Cho S., Hong J., Kim D., Bu J.; "PZT cantilever array integrated with piezoresistor sensor for high speed parallel operation of AFM"; Sensors and Actuators A: Physical Volume 103 Issues 1-2 (2003) p.122-129
  • Kitazawa M., Shiotani K., Toda A.; "Batch Fabrication of Sharpened Silicon Nitride Tips"; Jpn. J. Appl. Phys. 42 (2003) p.4844-4847
  • Kodera N., Kinoshita T., Ito T., Ando T.; "High-resolution imaging of myosin motor in action by a high-speed atomic force microscope"; Adv. Exp. Med. Biol. 538 (2003) p.119-127
  • Kodera N., Naito Y., Ito T., Ando T.; "Improvements on a high-speed atomic force Microscope"; Biophys. J. 84 (2003)
  • Pedrak R., Ivanov T., Ivanova K., Gotszalk T., Abedinov N., Rangelow I. W., Edinger K., Tomerov E., Schenkel T., Hudek P.; "Micromachined atomic force microscopy sensor with integrated piezoresistive sensor and thermal bimorph actuator for high-speed tapping-mode atomic force microscopy phase-imaging in higher eigenmodes"; J. Vac. Sci. Technol. B 21/6 (2003) p.3102-3107
  • Rogers B., Sulchek T., Murray K., York D., Jones M., Manning L., Malekos S., Beneschott B., Adams J. D., Cavazos H., Minne S. C.; "High speed tapping mode atomic force microscopy in liquid using an insulated piezoelectric cantilever"; Rev. Sci. Instrum. 74 (2003) p.4683
  • Schitter G., Stemmer A.; "Model-based signal conditioning for high-speed atomic force and friction force microscopy"; Microelectronic Engineering Volumes 67-68(2003) p.938-944

Papers 2002:

  • Ando T., Kodera N., Maruyama D., Takai E., Saito K., Toda A.; "A High-speed atomic force microscope for studying biological macromolecules in action"; Jpn. J. Appl. Phys. 41 (2002) p.4851-4856
  • Kawakatsu H., Kawai S., Saya D., Nagashio M., Kobayashi D., Toshiyoshi H., Fujita H.; "Towards atomic force microscopy up to 100 MHz"; Review of Scientific Instruments 73 (2002) p.2317
  • Schäffer T.; "Force spectroscopy with a large dynamic range using small cantilevers and an array detector"; Journal of Applied Physics 91/7 (2002) p.4739-4746

Papers 2001:

  • Ando T., Kodera N., Takai E., Maruyama D., Saito K., Toda A.; "A high-speed atomic force microscope for studying biological macromolecules"; Proc. Natl. Acad. Sci. USA 98 (2001) p.12468-12472
  • Hobbs J., Humphris A., Miles M.; "In situ atomic force microscopy of polyethylene crystallization. 1. Crystallization from an oriented backbone"; Macromolecules 34 (2001) p.5508-5519
  • Nam H.-J., Cho S., Yee Y., Lee H.-M., Kim D.-C., Bu J.-U., Hong J.; "Fabrication and characteristics of piezoelectric PZT cantilever for high speed atomic force microscopy"; Integrated Ferroelectrics Volume 35 Issue 1 - 4 (2001) p.185-197

    Schäffer T., Jiao Y.; "High speed force mapping using small cantilevers"; Biophysical Journal 80 (2001)

Papers 2000:

  • Chand A., Viani M., Schäffer T., Hansma P.; "Microfabricated small metal cantilevers with silicon tip for atomic force microscopy"; Journal of Microelectromechanical Systems 9 (2000) p.112-116
  • Hosaka S., Etoh K., Kikukawa A., Koyanagi H.; "Megahertz silicon atomic force microscopy (AFM) cantilever and high-speed readout in AFM-based recording"; J. Vac. Sci. Technol. B 18 (2000) p.94
  • Schäffer T., Richter M., Viani M.; "Array detector for the atomic force microscope"; Appl. Phys. Lett. 76 (2000) p.3644
  • Sulchek T., Hsieh R., Adams J., Minne S., Quate C., Adderton D.; "High-speed atomic force microscopy in liquid"; Rev. Sci. Instrum. 71 (2000) p.2097
  • Sulchek T., Hsieh R., Adams J., Yaralioglu G., Minne S., Quate C., Cleveland J., Atalar A., Adderton D.; "High-speed tapping mode imaging with active Q control for atomic force microscopy"; Appl. Phys. Lett. 76 (2000) p.1473
  • Viani M., Pietrasanta L., Thompson J., Chand A., Gebeshuber I., Kindt J., Richter M., Hansma H., Hansma P.; "Probing protein-protein interactions in real time"; Nature Structural Biology Vol. 7 (8) (2000) p.644-647

Papers 1999:

  • Sulchek T., Minne S., Adams J., Fletcher D., Atalar A., Quate C., Adderton D.; "Dual integrated actuators for extended range high speed atomic force microscopy"; Appl. Phys. Lett. 75 (1999) p.1637
  • Viani M., Schäffer T., Chand A., Rief M., Gaub H., Hansma P.; "Small cantilevers for force spectroscopy of single molecules"; Journal of Applied Physics 86/4 (1999) p.2258-2262
  • Viani M., Schäffer T., Paloczi G., Pietrasanta L., Smith B., Thompson J., Richter M., Rief M., Gaub H., Plaxco K., Cleveland A., Hansma H., Hansma P.; "Fast imaging and fast force spectroscopy of single biopolymers with a new atomic force microscope designed for small cantilevers"; Rev. Sci. Instrum. 70 (1999) p.4300

Papers 1998:

  • Hosaka S., Etoh K., Kikukawa A., Koyanagi H., Itoh K.; "6.6 MHz silicon AFM cantilever for high-speed readout in AFM-based recording"; Microelectronic engineering (1998) p.109-112
  • Minne S., Yaralioglu G., Manalis S., Adams J., Zesch J., Atalar A., Quate C.; "Automated parallel high-speed atomic force microscopy"; Appl. Phys. Lett. 72 (1998) p.2340
  • Paloczi G., Smith B., Hansma P., Walters D., Wendman M.; "Rapid imaging of calcite crystal growth using atomic force microscopy with small cantilevers"; Appl. Phys. Lett. 73 (1998) p.1658
  • Schäffer T., Hansma P.; "Characterization and optimization of the detection sensitivity of an atomic force microscope for small cantilevers"; J. Appl. Phys. 84 (1998) p.4661

Papers 1997:

  • Schäffer T., Viani M., Walters D., Drake B., Runge E., Cleveland J., Wendman M., Hansma P.; "Atomic force microscope for small cantilevers"; Proc. SPIE 3009 (1997) p.48-52
  • Walters D., Viani M., Paloczi G., Schäffer T., Cleveland J., Wendman M., Gurley G., Elings V., Hansma P.; "Atomic force microscopy using small cantilevers"; Proc. SPIE 3009/43 (1997)

Papers 1996:

  • Manalis S., Minne S., Quate C.; "Atomic force microscopy for high speed imaging using cantilevers with an integrated actuator and sensor"; Appl. Phys. Lett. 68 (1996) p.871
  • Manalis S. R., Minne S. C., Atalar A., Quate C. F.; "High‐speed atomic force microscopy using an integrated actuator and optical lever detection"; Review of Scientific Instruments Volume 67 Issue 9 (1996) p.3294-3297
  • Schäffer T., Cleveland J., Ohnesorge F., Walters D., Hansma P.; "Studies of vibrating atomic force microscope cantilevers in liquid"; J. Appl. Phys. 80/7 (1996) p.3622-3627
  • Walters D., Cleveland J., Thomson N., Hansma P., Wendman M., Gurley G., Elings V.; "Short cantilevers for atomic force microscopy"; Rev. Sci. Instrum. 67 (1996) p.3583-3590

Previous papers:

  • Hillner P.E., Gratz A.J., Manne S., Hansma P.K.; "Atomic-scale imaging of calcite growth and dissolution in real time"; Geology (1992) p.359-362
  • Barrett R., Quate C.; "High-speed, large-scale imaging with the atomic force microscope"; Journal of Vacuum Science & Technology B: Microelectronics and Nanometer Structures Volume 9 Issue 2 (1991) p.302-306